Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NJS7_GASACPatched domain containing 4. (890 aa)    
Predicted Functional Partners:
G3PPE1_GASAC
WD_REPEATS_REGION domain-containing protein.
      
 0.624
G3P1W5_GASAC
FIC domain containing.
      
 0.585
G3Q9X3_GASAC
Receptor-interacting serine-threonine kinase 4.
    
 
 0.578
G3PQH3_GASAC
Uncharacterized protein.
   
  
 0.556
G3PT65_GASAC
Valosin containing protein (p97)/p47 complex interacting protein 1.
      
 0.553
G3NHP8_GASAC
Pleiomorphic adenoma gene-like 2.
      
 0.543
G3PMC7_GASAC
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.483
PXMP4
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.476
G3PGT2_GASAC
Kelch-like family member 15.
      
 0.471
G3PGZ7_GASAC
Spermidine/spermine N1-acetyltransferase 1b.
      
 0.471
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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