Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NK15_GASACUncharacterized protein. (163 aa)    
Predicted Functional Partners:
G3N415_GASAC
LAG1_DNAbind domain-containing protein.
    
 0.477
G3PTN1_GASAC
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.477
G3NQ73_GASAC
PAS domain-containing protein.
    
 0.452
G3PJQ0_GASAC
Period circadian clock 2.
    
 0.452
G3Q6L3_GASAC
Period circadian clock 1b.
    
 0.452
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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