Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NK27_GASACUncharacterized protein. (342 aa)    
Predicted Functional Partners:
G3NSQ1_GASAC
Tyrosine-protein kinase.
   
    0.962
G3PXA6_GASAC
Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...]
   
    0.962
G3PSV1_GASAC
RNA polymerase II associated protein 2.
   
    0.957
G3P1T7_GASAC
Uncharacterized protein.
   
    0.898
G3P1U1_GASAC
Uncharacterized protein.
   
    0.898
G3QBL6_GASAC
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
    
   0.865
G3PBF4_GASAC
Solute carrier family 25 member 21; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.766
G3P8K0_GASAC
Family with sequence similarity 98 member B.
      
 0.701
G3P959_GASAC
Interactor of little elongator complex ELL subunit 2.
      
 0.697
G3PMQ3_GASAC
Astrotactin 1.
   
    0.680
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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