G3NK31_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3NK31_GASAC

Parathyroid hormone-like hormone b. (175 aa)

Predicted Functional Partners:

G3NVN3_GASAC

0.927

G3PZF8_GASAC

0.926

G3NYJ0_GASAC

0.903

G3PPH5_GASAC

0.881

G3NCX9_GASAC

0.768

G3PYL1_GASAC

0.765

G3NIS1_GASAC

0.764

G3NAQ2_GASAC

0.762

G3NCR5_GASAC

0.762

G3NGC7_GASAC

0.762

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NAQ2_GASAC	G3NCX9_GASAC	ENSGACP00000002397	ENSGACP00000003179	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.697
G3NAQ2_GASAC	G3NGC7_GASAC	ENSGACP00000002397	ENSGACP00000004382	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Vasoactive intestinal peptide receptor 1b; Belongs to the G-protein coupled receptor 2 family.	0.558
G3NAQ2_GASAC	G3NK31_GASAC	ENSGACP00000002397	ENSGACP00000005693	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Parathyroid hormone-like hormone b.	0.762
G3NAQ2_GASAC	G3PYL1_GASAC	ENSGACP00000002397	ENSGACP00000022701	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Growth hormone releasing hormone receptor a; Belongs to the G-protein coupled receptor 2 family.	0.566
G3NCR5_GASAC	G3NCX9_GASAC	ENSGACP00000003115	ENSGACP00000003179	Calcitonin receptor-like a; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.742
G3NCR5_GASAC	G3NK31_GASAC	ENSGACP00000003115	ENSGACP00000005693	Calcitonin receptor-like a; Belongs to the G-protein coupled receptor 2 family.	Parathyroid hormone-like hormone b.	0.762
G3NCR5_GASAC	G3NVN3_GASAC	ENSGACP00000003115	ENSGACP00000009402	Calcitonin receptor-like a; Belongs to the G-protein coupled receptor 2 family.	Parathyroid hormone 1 receptor b; Belongs to the G-protein coupled receptor 2 family.	0.482
G3NCR5_GASAC	G3NYJ0_GASAC	ENSGACP00000003115	ENSGACP00000010410	Calcitonin receptor-like a; Belongs to the G-protein coupled receptor 2 family.	Parathyroid hormone 2 receptor; Belongs to the G-protein coupled receptor 2 family.	0.451
G3NCR5_GASAC	G3PZF8_GASAC	ENSGACP00000003115	ENSGACP00000022998	Calcitonin receptor-like a; Belongs to the G-protein coupled receptor 2 family.	Parathyroid hormone 1 receptor a; Belongs to the G-protein coupled receptor 2 family.	0.474
G3NCX9_GASAC	G3NAQ2_GASAC	ENSGACP00000003179	ENSGACP00000002397	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.697
G3NCX9_GASAC	G3NCR5_GASAC	ENSGACP00000003179	ENSGACP00000003115	Uncharacterized protein.	Calcitonin receptor-like a; Belongs to the G-protein coupled receptor 2 family.	0.742
G3NCX9_GASAC	G3NGC7_GASAC	ENSGACP00000003179	ENSGACP00000004382	Uncharacterized protein.	Vasoactive intestinal peptide receptor 1b; Belongs to the G-protein coupled receptor 2 family.	0.690
G3NCX9_GASAC	G3NIS1_GASAC	ENSGACP00000003179	ENSGACP00000005231	Uncharacterized protein.	Uncharacterized protein.	0.677
G3NCX9_GASAC	G3NK31_GASAC	ENSGACP00000003179	ENSGACP00000005693	Uncharacterized protein.	Parathyroid hormone-like hormone b.	0.768
G3NCX9_GASAC	G3NVN3_GASAC	ENSGACP00000003179	ENSGACP00000009402	Uncharacterized protein.	Parathyroid hormone 1 receptor b; Belongs to the G-protein coupled receptor 2 family.	0.973
G3NCX9_GASAC	G3NYJ0_GASAC	ENSGACP00000003179	ENSGACP00000010410	Uncharacterized protein.	Parathyroid hormone 2 receptor; Belongs to the G-protein coupled receptor 2 family.	0.969
G3NCX9_GASAC	G3PYL1_GASAC	ENSGACP00000003179	ENSGACP00000022701	Uncharacterized protein.	Growth hormone releasing hormone receptor a; Belongs to the G-protein coupled receptor 2 family.	0.690
G3NCX9_GASAC	G3PZF8_GASAC	ENSGACP00000003179	ENSGACP00000022998	Uncharacterized protein.	Parathyroid hormone 1 receptor a; Belongs to the G-protein coupled receptor 2 family.	0.969
G3NGC7_GASAC	G3NAQ2_GASAC	ENSGACP00000004382	ENSGACP00000002397	Vasoactive intestinal peptide receptor 1b; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.558
G3NGC7_GASAC	G3NCX9_GASAC	ENSGACP00000004382	ENSGACP00000003179	Vasoactive intestinal peptide receptor 1b; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.690