STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NK66_GASACAnkyrin repeat domain 9. (273 aa)    
Predicted Functional Partners:
G3NE47_GASAC
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.749
G3PMC3_GASAC
NEDD8 ubiquitin like modifier, like.
    
  0.741
G3PIG8_GASAC
COMM domain containing 8.
   
  0.736
G3NXK2_GASAC
Ring finger protein 7.
    
  0.733
G3PJH0_GASAC
Intraflagellar transport 81 homolog.
    
 0.726
G3NLF4_GASAC
COMM domain containing 4.
    
 0.713
G3N915_GASAC
Intraflagellar transport 88 homolog.
   
 0.711
G3PYQ9_GASAC
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.708
G3P9M1_GASAC
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.707
G3PQ47_GASAC
Fleer.
    
 0.701
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.