STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NK71_GASACSRY-box transcription factor 17. (398 aa)    
Predicted Functional Partners:
G3PZN0_GASAC
Lymphoid enhancer-binding factor 1.
    
0.891
G3NAZ4_GASAC
HMG box domain-containing protein.
    
0.879
G3PB27_GASAC
Transcription factor 7 like 1b.
    
0.879
G3NK61_GASAC
SRY-box transcription factor 32.
  
  
0.850
G3PZT5_GASAC
POU domain protein.
    
 0.834
G3NRM5_GASAC
Catenin (cadherin-associated protein), beta 1.
    
 0.806
G3N550_GASAC
Uncharacterized protein.
    
 0.660
G3NRF1_GASAC
Uncharacterized protein.
    
 0.660
G3Q2Y3_GASAC
Junction plakoglobin a.
    
 0.660
G3PRA9_GASAC
Runt-related transcription factor.
   
 0.659
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.