STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NKC6_GASACRRN3 homolog, RNA polymerase I transcription factor. (596 aa)    
Predicted Functional Partners:
G3NT27_GASAC
TWIST neighbor.
   
 0.999
G3Q4N9_GASAC
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.999
G3NF51_GASAC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.998
G3ND06_GASAC
RNA polymerase I and III subunit C.
   
 0.995
G3PUD8_GASAC
RNA polymerase I subunit E.
   
 0.995
G3N9B3_GASAC
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.993
G3PGG0_GASAC
CD3e molecule, epsilon associated protein.
   
 0.990
G3NWJ8_GASAC
Polymerase (RNA) II (DNA directed) polypeptide F.
   
 0.988
POLR2E
RNA polymerase II subunit E.
    
 0.987
G3Q3W5_GASAC
RNA polymerase I and III subunit D.
   
 0.986
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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