Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NKI2_GASACRhomboid domain-containing protein. (376 aa)    
Predicted Functional Partners:
G3PBL6_GASAC
PTEN induced kinase 1.
    
 
 0.849
G3PVL4_GASAC
YME1-like 1b.
  
 
 0.841
G3PP23_GASAC
PHB domain-containing protein.
  
 0.751
G3Q2H8_GASAC
Stomatin (EPB72)-like 2.
  
 0.751
PHB2
Prohibitin.
  
 0.743
G3P3S6_GASAC
OPA1 mitochondrial dynamin like GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.720
G3P846_GASAC
Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family.
      
 0.677
G3PRY8_GASAC
SPG7 matrix AAA peptidase subunit, paraplegin.
  
 
 0.677
G3PFJ2_GASAC
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 
 0.676
G3P716_GASAC
Cytochrome c oxidase assembly homolog 11 (yeast).
  
  
 0.658
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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