Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CELF2CUGBP Elav-like family member 2. (539 aa)    
Predicted Functional Partners:
G3Q0U4_GASAC
RRM domain-containing protein.
   
 
 0.803
G3Q573_GASAC
RRM domain-containing protein.
   
 
 0.803
G3PLG5_GASAC
Fumarylacetoacetase.
    
 
 0.714
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
    
 
 0.709
G3PZQ0_GASAC
Cytoplasmic polyadenylation element binding protein 1b.
    
 
 0.631
G3PLH6_GASAC
Notch receptor 1b.
    
   0.603
G3PUD0_GASAC
Notch receptor 1a.
    
   0.603
G3Q3L8_GASAC
Proteasome 26S subunit, non-ATPase 10.
    
 
 0.601
G3NHG1_GASAC
RALY heterogeneous nuclear ribonucleoprotein.
    
 
 0.560
G3NMM8_GASAC
RRM domain-containing protein.
    
 
 0.560
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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