STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NKK2_GASACSpastin; Belongs to the AAA ATPase family. (495 aa)    
Predicted Functional Partners:
G3PK47_GASAC
UBX domain protein 7.
   
 0.976
G3PS32_GASAC
IST1 factor associated with ESCRT-III.
    
 0.935
G3QAG4_GASAC
Chromatin modifying protein 1B.
    
 0.892
G3NZY8_GASAC
Charged multivesicular body protein 3.
   
 0.885
G3NIR4_GASAC
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.860
G3Q071_GASAC
UBX domain protein 1.
    
 0.833
G3NLB6_GASAC
YOD1 deubiquitinase.
   
 0.828
G3P5A7_GASAC
Uncharacterized protein.
    
 0.828
G3PN45_GASAC
NPL4 homolog, ubiquitin recognition factor.
    
 0.828
G3PAV6_GASAC
Fas (TNFRSF6) associated factor 1.
   
 0.805
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.