STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NKK6_GASACBifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (469 aa)    
Predicted Functional Partners:
G3NBG2_GASAC
Ribosomal protein L8.
   
 
 0.932
G3NJ92_GASAC
Mitochondrial ribosomal protein L2.
    
 
 0.763
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
    
 
 0.657
G3NA25_GASAC
tRNA-yW synthesizing protein 5.
      
 0.518
JMJD8
Jumonji domain containing 8.
      
 0.510
G3NK58_GASAC
Mitochondrial ribosomal protein L15.
   
 
 0.493
G3PCB1_GASAC
Uncharacterized protein.
      
 0.454
G3PNL7_GASAC
Hspb associated protein 1.
      
 0.453
G3PQ30_GASAC
Embryonic ectoderm development.
    
 
 0.444
G3Q3T2_GASAC
Selenoprotein H.
   
 0.435
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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