Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1orf43Chromosome 1 open reading frame 43. (251 aa)    
Predicted Functional Partners:
G3NQ28_GASAC
Si:ch211-233a24.2.
    
 
 0.896
G3NYR8_GASAC
ER membrane protein complex subunit 7.
      
 0.810
G3P6Q6_GASAC
Myeloid leukemia factor 2.
   
  
 0.717
G3P674_GASAC
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
  
 0.696
G3PW79_GASAC
Endothelial differentiation-related factor 1.
      
 0.673
G3NIW2_GASAC
Charged multivesicular body protein 2A.
      
 0.632
G3NZF9_GASAC
Uncharacterized protein.
      
 0.618
G3NDU6_GASAC
Proteasome subunit beta 2.
   
  
 0.567
G3PTZ7_GASAC
Zgc:101679.
      
 0.551
G3P597_GASAC
Valosin containing protein; Belongs to the AAA ATPase family.
      
 0.536
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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