STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NKM3_GASACUncharacterized protein. (217 aa)    
Predicted Functional Partners:
LOC100174884
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
    
 
 0.672
G3P7U0_GASAC
Zyxin.
    
   0.625
G3NKZ5_GASAC
Taspase, threonine aspartase, 1.
      
 0.505
G3PC36_GASAC
Si:dkey-119f1.1.
   
   0.482
G3PCW3_GASAC
Structural maintenance of chromosomes 6.
    
   0.477
G3QB99_GASAC
Arachidonate 5-lipoxygenase-activating protein.
   
  
 0.468
G3NS28_GASAC
Immunoglobulin superfamily member 11.
      
 0.418
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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