STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NKM8_GASACCollagen, type IV, alpha 3. (1648 aa)    
Predicted Functional Partners:
G3PQY8_GASAC
Integrin beta; Belongs to the integrin beta chain family.
   
 0.866
G3P1C9_GASAC
Integrin beta; Belongs to the integrin beta chain family.
    
 0.862
G3NT92_GASAC
Integrin beta; Belongs to the integrin beta chain family.
    
 0.858
G3NA85_GASAC
Integrin beta; Belongs to the integrin beta chain family.
    
 0.849
G3PBZ4_GASAC
Link domain-containing protein.
    
 0.849
G3NL26_GASAC
Integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2; Belongs to the integrin alpha chain family.
    
 0.847
G3PDG3_GASAC
Integrin, alpha 10; Belongs to the integrin alpha chain family.
    
 0.847
G3PUX7_GASAC
Integrin, alpha 1; Belongs to the integrin alpha chain family.
    
 0.847
G3NP21_GASAC
Integrin, alpha 9; Belongs to the integrin alpha chain family.
    
 0.843
ITGA7
Integrin subunit alpha 7; Belongs to the integrin alpha chain family.
    
 0.837
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.