STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NKP7_GASACRogdi atypical leucine zipper. (297 aa)    
Predicted Functional Partners:
G3PWX1_GASAC
Dmx-like 2.
   
 
 0.931
DMXL1
Dmx like 1.
    
 
 0.927
G3PNZ9_GASAC
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
   
 
 0.893
G3QCJ8_GASAC
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 
 0.871
G3Q8R9_GASAC
ATPase H+ transporting V1 subunit E1b.
   
 
 0.787
G3PKH4_GASAC
ATPase H+ transporting V1 subunit E1a.
    
 
 0.776
G3PYE2_GASAC
V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.
   
 
 0.701
WDR7
WD repeat domain 7.
   
 
 0.666
G3NKI7_GASAC
Glyoxylate reductase 1 homolog (Arabidopsis).
 
      0.655
G3QB38_GASAC
Abhydrolase domain containing 11.
   
  
 0.581
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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