STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NKV0_GASACSerine palmitoyltransferase, long chain base subunit 3. (553 aa)    
Predicted Functional Partners:
G3Q476_GASAC
Serine palmitoyltransferase, long chain base subunit 1.
  
0.976
G3NMZ5_GASAC
Uncharacterized protein.
   
 0.908
G3PSH5_GASAC
Sorbitol dehydrogenase.
 
 
 0.858
G3PJ70_GASAC
3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.848
CBS
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.834
G3NEA6_GASAC
PALP domain-containing protein.
   
 0.821
G3NKR2_GASAC
Serine--pyruvate aminotransferase.
    
 0.818
G3PKG4_GASAC
Serine--pyruvate aminotransferase.
  
 
 0.818
G3P2C2_GASAC
Phosphoserine phosphatase.
    
 0.806
G3N980_GASAC
GST C-terminal domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.796
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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