Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NKY4_GASACXylose isomerase. (439 aa)    
Predicted Functional Partners:
G3Q216_GASAC
Xylulokinase homolog (H. influenzae).
  
 
 0.992
G3PSH5_GASAC
Sorbitol dehydrogenase.
    
 0.937
G3NT67_GASAC
GFO_IDH_MocA domain-containing protein.
    
 0.917
G3PWC4_GASAC
GFO_IDH_MocA domain-containing protein.
    
 0.917
G3Q539_GASAC
Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 2.
    
  0.901
G3NFG7_GASAC
Ketohexokinase.
     
  0.900
G3PII9_GASAC
Hexokinase 2.
     
 0.900
G3PUC9_GASAC
Phosphotransferase.
     
 0.900
G3PUF3_GASAC
Hexokinase 1.
     
 0.900
HK1
Hexokinase 1.
     
 0.900
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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