Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NKZ9_GASACUncharacterized protein. (226 aa)    
Predicted Functional Partners:
NFX1
Nuclear transcription factor, X-box binding 1.
 
      0.895
RPL7A
Ribosomal protein L7a.
   
 
 0.742
G3NGV9_GASAC
Ribosomal protein S19.
    
   0.732
G3P3Y9_GASAC
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
    
   0.708
G3PJH2_GASAC
Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
    
   0.708
G3PR75_GASAC
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
    0.691
G3Q6L2_GASAC
RAD50 interactor 1.
   
    0.691
G3PDW8_GASAC
Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
    0.682
G3PJC8_GASAC
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
   0.680
G3Q0K3_GASAC
Eukaryotic translation elongation factor 1 gamma.
   
   0.672
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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