G3NL12_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3NL12_GASAC

Nuclear receptor binding SET domain protein 2. (1355 aa)

Predicted Functional Partners:

G3NHS8_GASAC

0.871

G3PIW3_GASAC

0.871

G3PGG1_GASAC

0.865

CAMKMT

0.853

G3NGA8_GASAC

0.846

G3NZ68_GASAC

0.846

G3PQ30_GASAC

0.842

G3PN50_GASAC

0.803

G3P1H7_GASAC

0.802

G3N724_GASAC

0.799

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAMKMT	G3NGA8_GASAC	ENSGACP00000014275	ENSGACP00000004363	Calmodulin-lysine N-methyltransferase.	Ash1 (absent, small, or homeotic)-like (Drosophila).	0.867
CAMKMT	G3NL12_GASAC	ENSGACP00000014275	ENSGACP00000006025	Calmodulin-lysine N-methyltransferase.	Nuclear receptor binding SET domain protein 2.	0.853
CAMKMT	G3P1H7_GASAC	ENSGACP00000014275	ENSGACP00000011450	Calmodulin-lysine N-methyltransferase.	WW domain-containing protein.	0.853
CAMKMT	G3PGG1_GASAC	ENSGACP00000014275	ENSGACP00000016685	Calmodulin-lysine N-methyltransferase.	Histone-lysine N-methyltransferase, H3 lysine-79 specific.	0.878
G3N724_GASAC	G3NGA8_GASAC	ENSGACP00000001099	ENSGACP00000004363	Ash2 like, histone lysine methyltransferase complex subunit.	Ash1 (absent, small, or homeotic)-like (Drosophila).	0.853
G3N724_GASAC	G3NL12_GASAC	ENSGACP00000001099	ENSGACP00000006025	Ash2 like, histone lysine methyltransferase complex subunit.	Nuclear receptor binding SET domain protein 2.	0.799
G3N724_GASAC	G3NZ68_GASAC	ENSGACP00000001099	ENSGACP00000010640	Ash2 like, histone lysine methyltransferase complex subunit.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.937
G3N724_GASAC	G3P1H7_GASAC	ENSGACP00000001099	ENSGACP00000011450	Ash2 like, histone lysine methyltransferase complex subunit.	WW domain-containing protein.	0.877
G3N724_GASAC	G3PGG1_GASAC	ENSGACP00000001099	ENSGACP00000016685	Ash2 like, histone lysine methyltransferase complex subunit.	Histone-lysine N-methyltransferase, H3 lysine-79 specific.	0.528
G3N724_GASAC	G3PN50_GASAC	ENSGACP00000001099	ENSGACP00000019033	Ash2 like, histone lysine methyltransferase complex subunit.	PAX interacting (with transcription-activation domain) protein 1.	0.965
G3N724_GASAC	G3PQ30_GASAC	ENSGACP00000001099	ENSGACP00000019715	Ash2 like, histone lysine methyltransferase complex subunit.	Embryonic ectoderm development.	0.478
G3NGA8_GASAC	CAMKMT	ENSGACP00000004363	ENSGACP00000014275	Ash1 (absent, small, or homeotic)-like (Drosophila).	Calmodulin-lysine N-methyltransferase.	0.867
G3NGA8_GASAC	G3N724_GASAC	ENSGACP00000004363	ENSGACP00000001099	Ash1 (absent, small, or homeotic)-like (Drosophila).	Ash2 like, histone lysine methyltransferase complex subunit.	0.853
G3NGA8_GASAC	G3NHS8_GASAC	ENSGACP00000004363	ENSGACP00000004888	Ash1 (absent, small, or homeotic)-like (Drosophila).	Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.	0.864
G3NGA8_GASAC	G3NL12_GASAC	ENSGACP00000004363	ENSGACP00000006025	Ash1 (absent, small, or homeotic)-like (Drosophila).	Nuclear receptor binding SET domain protein 2.	0.846
G3NGA8_GASAC	G3NZ68_GASAC	ENSGACP00000004363	ENSGACP00000010640	Ash1 (absent, small, or homeotic)-like (Drosophila).	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.731
G3NGA8_GASAC	G3P1H7_GASAC	ENSGACP00000004363	ENSGACP00000011450	Ash1 (absent, small, or homeotic)-like (Drosophila).	WW domain-containing protein.	0.976
G3NGA8_GASAC	G3PGG1_GASAC	ENSGACP00000004363	ENSGACP00000016685	Ash1 (absent, small, or homeotic)-like (Drosophila).	Histone-lysine N-methyltransferase, H3 lysine-79 specific.	0.933
G3NGA8_GASAC	G3PIW3_GASAC	ENSGACP00000004363	ENSGACP00000017542	Ash1 (absent, small, or homeotic)-like (Drosophila).	Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.	0.864
G3NGA8_GASAC	G3PN50_GASAC	ENSGACP00000004363	ENSGACP00000019033	Ash1 (absent, small, or homeotic)-like (Drosophila).	PAX interacting (with transcription-activation domain) protein 1.	0.584