STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NL36_GASACTNRC6-PABC_bdg domain-containing protein. (1735 aa)    
Predicted Functional Partners:
G3Q8V8_GASAC
GRB10 interacting GYF protein 1a.
    
 
 0.896
G3PJK6_GASAC
GRB10 interacting GYF protein 2.
    
 
 0.828
G3N5Z1_GASAC
Sulfite oxidase.
     
 0.788
AGO2
Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...]
   
 0.783
G3PFT0_GASAC
Argonaute RISC component 1; Belongs to the argonaute family.
   
 0.777
AGO3
Argonaute RISC catalytic component 3; Belongs to the argonaute family.
    
 0.776
EIF2C4
Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily.
    
 0.776
G3PFT8_GASAC
Argonaute RISC catalytic component 3a; Belongs to the argonaute family.
    
 0.776
G3NEX1_GASAC
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.724
G3NX60_GASAC
Transmembrane p24 trafficking protein 7.
    
  0.684
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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