STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NL85_GASACPdgfa associated protein 1a. (172 aa)    
Predicted Functional Partners:
G3PBV5_GASAC
Platelet-derived growth factor alpha polypeptide b; Belongs to the PDGF/VEGF growth factor family.
    
 
 0.566
G3Q409_GASAC
Prefoldin subunit 6.
   
  
 0.459
G3NCR7_GASAC
Death-associated protein.
      
 0.447
G3P8F7_GASAC
Reticulocalbin 2.
      
 0.431
G3NLQ0_GASAC
Carnitine deficiency-associated gene expressed in ventricle 3.
   
  
 0.429
G3PHQ4_GASAC
HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1.
   
 
 0.422
G3NKU1_GASAC
Deoxythymidylate kinase (thymidylate kinase).
   
  
 0.414
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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