Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NLB1_GASACFERM, RhoGEF and pleckstrin domain protein 2. (1052 aa)    
Predicted Functional Partners:
G3PA20_GASAC
Uncharacterized protein.
     
 0.943
CDC42
Cell division cycle 42.
     
 0.943
G3P6U5_GASAC
Uncharacterized protein.
     
  0.942
G3Q4B9_GASAC
Uncharacterized protein.
     
  0.942
SRC
Tyrosine-protein kinase.
    
  0.934
G3PBM5_GASAC
Tyrosine-protein kinase.
    
  0.934
RND1
Rho family GTPase 1.
     
 0.635
G3P142_GASAC
Rho family GTPase 1b.
     
 0.635
G3NM43_GASAC
RAS related.
     
 0.615
G3NA91_GASAC
Neuropilin; Belongs to the neuropilin family.
     
 0.600
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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