STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NLB6_GASACYOD1 deubiquitinase. (303 aa)    
Predicted Functional Partners:
G3NIR4_GASAC
Ubiquitin recognition factor in ER associated degradation 1.
   
 
 0.983
G3Q7Y0_GASAC
Phospholipase A2-activating protein.
    
 
 0.983
G3NK49_GASAC
NSFL1 (p97) cofactor (p47).
   
 
 0.978
G3QA52_GASAC
Ubiquitin B.
    
 
 0.969
G3PCG6_GASAC
Ribosomal protein S27a.
   
 
 0.960
G3P597_GASAC
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.959
G3Q4U8_GASAC
Zgc:136908; Belongs to the AAA ATPase family.
   
 0.959
SPATA5
Spermatogenesis associated 5.
   
 0.953
G3PX92_GASAC
Spermatogenesis associated 5-like 1.
   
 0.953
G3NW73_GASAC
Ubiquitination factor E4B, UFD2 homolog (S. cerevisiae).
    
 
 0.950
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.