STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NLC4_GASACTyrosyl-DNA phosphodiesterase 2b. (355 aa)    
Predicted Functional Partners:
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.877
G3PCG6_GASAC
Ribosomal protein S27a.
    
 
 0.877
G3QA52_GASAC
Ubiquitin B.
    
 
 0.818
G3NM92_GASAC
X-ray repair complementing defective repair in Chinese hamster cells 6.
     
 0.712
G3NB89_GASAC
Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family.
     
 0.707
G3NR75_GASAC
Small ubiquitin-related modifier.
   
 
 0.693
G3P719_GASAC
Small ubiquitin-related modifier.
   
 
 0.693
G3PF81_GASAC
Small ubiquitin-related modifier.
   
 
 0.693
G3Q6X1_GASAC
Small ubiquitin-related modifier.
   
 
 0.693
G3Q9F4_GASAC
DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae).
     
 0.679
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.