STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NLC7_GASACATP-binding cassette, sub-family F (GCN20), member 2b. (610 aa)    
Predicted Functional Partners:
G3Q405_GASAC
ATP-binding cassette, sub-family E (OABP), member 1.
   
 
 0.960
G3P8M4_GASAC
Eukaryotic translation initiation factor 5B.
  
 
 0.912
G3N840_GASAC
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.891
G3PR63_GASAC
Mitochondrial ribosomal protein L27.
  
 
 0.874
G3QBL6_GASAC
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.870
G3Q8F8_GASAC
Mitochondrial ribosomal protein L4.
  
 
 0.865
G3NH71_GASAC
Ribosomal protein L35.
  
 
 0.864
G3Q8C6_GASAC
Uncharacterized protein.
  
   0.864
G3NBT2_GASAC
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.863
G3P5V0_GASAC
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.862
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.