Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHRNA1Cholinergic receptor nicotinic alpha 1 subunit. (466 aa)    
Predicted Functional Partners:
G3PDR2_GASAC
Uncharacterized protein.
  
  
 
0.900
G3NNT4_GASAC
Receptor-associated protein of the synapse, 43kD.
   
 
 0.726
G3PEJ3_GASAC
Cholinergic receptor, nicotinic, beta 2.
   
 0.700
G3PQL3_GASAC
Cholinergic receptor, nicotinic, gamma.
   
 0.700
G3PW73_GASAC
Cholinergic receptor, nicotinic, beta 4 (neuronal).
   
 0.700
G3PW86_GASAC
Cholinergic receptor, nicotinic, alpha 3.
   
 0.700
CHRNA6
Cholinergic receptor nicotinic alpha 6 subunit.
   
 0.700
G3Q357_GASAC
Cholinergic receptor, nicotinic, beta 5a.
   
 0.700
G3Q365_GASAC
Cholinergic receptor, nicotinic, alpha 6.
   
 0.700
G3Q8Y5_GASAC
Cholinergic receptor, nicotinic, beta 1 (muscle).
   
 0.700
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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