STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNA1Cholinergic receptor nicotinic alpha 1 subunit. (466 aa)    
Predicted Functional Partners:
G3QAN9_GASAC
Cholinergic receptor, nicotinic, epsilon.
  
0.884
G3NLC9_GASAC
Cholinergic receptor, nicotinic, alpha 4b.
  
0.809
G3PQ97_GASAC
Uncharacterized protein.
  
0.809
G3P8Z1_GASAC
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
0.808
G3Q8Y5_GASAC
Cholinergic receptor, nicotinic, beta 1 (muscle).
  
0.807
G3Q8Y7_GASAC
Cholinergic receptor, nicotinic, beta 1 (muscle) like.
  
0.801
G3Q357_GASAC
Cholinergic receptor, nicotinic, beta 5a.
  
0.800
G3PW73_GASAC
Cholinergic receptor, nicotinic, beta 4 (neuronal).
  
0.799
CHRNA6
Cholinergic receptor nicotinic alpha 6 subunit.
  
0.798
G3Q365_GASAC
Cholinergic receptor, nicotinic, alpha 6.
  
0.798
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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