STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGME1Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair. Belongs to the MGME1 family. (354 aa)    
Predicted Functional Partners:
G3N6W3_GASAC
ECSIT signalling integrator.
    
   0.656
G3PN71_GASAC
G-rich RNA sequence binding factor 1.
    
 
 0.577
G3NGY2_GASAC
Twinkle mtDNA helicase.
   
  
 0.525
G3PNR1_GASAC
Cytochrome c oxidase assembly factor 7.
      
 0.521
G3NXP2_GASAC
MutL homolog 3 (E. coli).
      
 0.515
G3PUG9_GASAC
DNA replication helicase/nuclease 2.
   
  
 0.509
G3PCJ9_GASAC
Polymerase (DNA directed), gamma.
    
 
 0.493
G3PCM3_GASAC
Carnosine N-methyltransferase 1.
      
 0.483
G3NGQ4_GASAC
Glycyl-tRNA synthetase.
   
  
 0.455
G3P996_GASAC
PYM homolog 1, exon junction complex associated factor.
      
 0.455
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.