STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NLI7_GASACMethyltransferase like 22. (400 aa)    
Predicted Functional Partners:
G3Q9J9_GASAC
Kin17 DNA and RNA binding protein.
    
 0.950
G3PRF7_GASAC
Eukaryotic translation elongation factor 2b.
   
 0.824
G3PHA5_GASAC
Tr-type G domain-containing protein.
    
 0.815
G3PGQ9_GASAC
B9 protein domain 1.
    
 0.788
G3NVD1_GASAC
B9 domain containing 2.
    
 0.772
G3QC31_GASAC
MKS transition zone complex subunit 1.
    
 0.726
G3P317_GASAC
Transmembrane protein 67.
     
 0.703
GFM1
Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...]
   
 0.698
G3P3L5_GASAC
Elongation factor Tu GTP binding domain containing 2.
    
 0.693
EFL1
Elongation factor like GTPase 1.
    
 0.693
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.