STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NLJ3_GASACNuclear receptor binding protein 2b. (466 aa)    
Predicted Functional Partners:
G3NE47_GASAC
Elongin C paralog a; Belongs to the SKP1 family.
    
 
 0.578
TSC22D1
TSC22 domain family member 1.
    
 
 0.561
G3PKL1_GASAC
Uncharacterized protein.
    
 
 0.561
TSC22D3
TSC22 domain family member 3.
    
 
 0.561
G3PV11_GASAC
Protein kinase domain-containing protein.
  
 
  
0.555
G3P5Z0_GASAC
Nuclear receptor binding protein 1.
  
 
  
0.553
G3NQ45_GASAC
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
      
 0.523
G3P382_GASAC
TSC22 domain family 2.
    
 
 0.521
G3PUD9_GASAC
Uncharacterized protein.
    
 
 0.521
G3P2X4_GASAC
BUD22 domain-containing protein.
      
 0.514
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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