Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NLM4_GASACSorting nexin 5. (387 aa)    
Predicted Functional Partners:
G3NAU0_GASAC
Sorting nexin 2.
   
 0.988
G3NWK1_GASAC
Sorting nexin 1a.
   
 0.932
G3PY10_GASAC
Sorting nexin 1b.
   
 0.932
G3NLK9_GASAC
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.927
G3NJD2_GASAC
Sorting nexin; Involved in several stages of intracellular trafficking.
  
  
 
0.901
G3N6A2_GASAC
Si:dkey-28n18.9.
     
 
0.900
G3NSS1_GASAC
PX domain-containing protein.
   
 0.895
SNX4
Sorting nexin 4.
   
 0.895
G3PUC0_GASAC
VPS26, retromer complex component A.
   
 
 0.878
G3PM30_GASAC
Sorting nexin 8a.
   
 0.870
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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