STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIR1Corepressor interacting with RBPJ, 1. (350 aa)    
Predicted Functional Partners:
G3PTN1_GASAC
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.931
G3QCA7_GASAC
Sap30-like.
    
 0.923
G3NP39_GASAC
SNW domain containing 1.
   
 
 0.922
G3N415_GASAC
LAG1_DNAbind domain-containing protein.
    
 0.914
G3Q287_GASAC
CWC25 spliceosome associated protein homolog.
   
 
 0.901
G3PFG0_GASAC
Nuclear receptor corepressor 2.
    
 0.896
G3QA56_GASAC
Uncharacterized protein.
    
 0.894
G3NW49_GASAC
Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 0.879
G3P372_GASAC
Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 0.879
G3PT86_GASAC
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 
 0.876
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.