STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NLQ0_GASACCarnitine deficiency-associated gene expressed in ventricle 3. (234 aa)    
Predicted Functional Partners:
G3P3J6_GASAC
Proliferation-associated 2G4, b.
   
    0.645
G3NXK2_GASAC
Ring finger protein 7.
      
 0.497
G3NCR7_GASAC
Death-associated protein.
      
 0.469
G3NL40_GASAC
Uncharacterized protein.
   
   0.469
G3NFG8_GASAC
Transcription factor.
   
  
 0.456
G3P151_GASAC
Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family.
   
    0.451
G3P5D9_GASAC
Matrilin 3a.
   
    0.451
G3PUT2_GASAC
Centromere protein F.
   
    0.451
G3NNL8_GASAC
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.435
G3NL85_GASAC
Pdgfa associated protein 1a.
   
  
 0.429
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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