G3NLS5_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

G3NLS5_GASAC

Beta-hexosaminidase. (541 aa)

Predicted Functional Partners:

CHIA

0.954

G3NH45_GASAC

0.954

G3NH79_GASAC

0.954

G3PC65_GASAC

0.954

G3PC76_GASAC

0.954

G3PFY5_GASAC

0.954

G3PG78_GASAC

0.954

G3NNT2_GASAC

0.952

G3NER2_GASAC

0.948

G3Q0A9_GASAC

0.948

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHIA	G3NH45_GASAC	ENSGACP00000000527	ENSGACP00000004653	Chitinase acidic; Belongs to the glycosyl hydrolase 18 family.	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	0.658
CHIA	G3NH79_GASAC	ENSGACP00000000527	ENSGACP00000004687	Chitinase acidic; Belongs to the glycosyl hydrolase 18 family.	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	0.658
CHIA	G3NLS5_GASAC	ENSGACP00000000527	ENSGACP00000006288	Chitinase acidic; Belongs to the glycosyl hydrolase 18 family.	Beta-hexosaminidase.	0.954
CHIA	G3PC65_GASAC	ENSGACP00000000527	ENSGACP00000015189	Chitinase acidic; Belongs to the glycosyl hydrolase 18 family.	Chitinase, acidic.1; Belongs to the glycosyl hydrolase 18 family.	0.662
CHIA	G3PC76_GASAC	ENSGACP00000000527	ENSGACP00000015200	Chitinase acidic; Belongs to the glycosyl hydrolase 18 family.	Chitinase, acidic.3; Belongs to the glycosyl hydrolase 18 family.	0.657
CHIA	G3PFY5_GASAC	ENSGACP00000000527	ENSGACP00000016509	Chitinase acidic; Belongs to the glycosyl hydrolase 18 family.	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	0.656
CHIA	G3PG78_GASAC	ENSGACP00000000527	ENSGACP00000016602	Chitinase acidic; Belongs to the glycosyl hydrolase 18 family.	Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	0.666
G3NER2_GASAC	G3NLS5_GASAC	ENSGACP00000003813	ENSGACP00000006288	Neuraminidase 1.	Beta-hexosaminidase.	0.948
G3NER2_GASAC	G3Q0A9_GASAC	ENSGACP00000003813	ENSGACP00000023299	Neuraminidase 1.	Beta-galactosidase.	0.997
G3NH45_GASAC	CHIA	ENSGACP00000004653	ENSGACP00000000527	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	Chitinase acidic; Belongs to the glycosyl hydrolase 18 family.	0.658
G3NH45_GASAC	G3NH79_GASAC	ENSGACP00000004653	ENSGACP00000004687	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	0.657
G3NH45_GASAC	G3NLS5_GASAC	ENSGACP00000004653	ENSGACP00000006288	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	Beta-hexosaminidase.	0.954
G3NH45_GASAC	G3PC65_GASAC	ENSGACP00000004653	ENSGACP00000015189	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	Chitinase, acidic.1; Belongs to the glycosyl hydrolase 18 family.	0.661
G3NH45_GASAC	G3PC76_GASAC	ENSGACP00000004653	ENSGACP00000015200	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	Chitinase, acidic.3; Belongs to the glycosyl hydrolase 18 family.	0.655
G3NH45_GASAC	G3PFY5_GASAC	ENSGACP00000004653	ENSGACP00000016509	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	0.660
G3NH45_GASAC	G3PG78_GASAC	ENSGACP00000004653	ENSGACP00000016602	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	0.661
G3NH79_GASAC	CHIA	ENSGACP00000004687	ENSGACP00000000527	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	Chitinase acidic; Belongs to the glycosyl hydrolase 18 family.	0.658
G3NH79_GASAC	G3NH45_GASAC	ENSGACP00000004687	ENSGACP00000004653	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	0.657
G3NH79_GASAC	G3NLS5_GASAC	ENSGACP00000004687	ENSGACP00000006288	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	Beta-hexosaminidase.	0.954
G3NH79_GASAC	G3PC65_GASAC	ENSGACP00000004687	ENSGACP00000015189	Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	Chitinase, acidic.1; Belongs to the glycosyl hydrolase 18 family.	0.662