STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NLS5_GASACBeta-hexosaminidase. (541 aa)    
Predicted Functional Partners:
G3NNT2_GASAC
Hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing.
     
 0.900
G3PZQ4_GASAC
Alpha-galactosidase.
   
 
 0.886
G3NAV9_GASAC
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
  
 0.885
G3Q9H8_GASAC
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
  
 0.885
G3PJC0_GASAC
Alpha-galactosidase.
   
 
 0.883
G3PLZ3_GASAC
Alpha-galactosidase.
   
 
 0.883
G3Q0A9_GASAC
Beta-galactosidase.
  
 
 0.883
G3NRB5_GASAC
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.882
CHIA
Chitinase acidic; Belongs to the glycosyl hydrolase 18 family.
    
 0.869
G3PFY5_GASAC
Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
    
 0.869
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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