Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NLV7_GASACSi:ch211-191a24.4. (292 aa)    
Predicted Functional Partners:
G3PT99_GASAC
MARVEL domain containing 3.
     
 
0.900
G3NU22_GASAC
Mal, T cell differentiation protein 2 (gene/pseudogene).
      
 0.625
RTKN
Rhotekin.
      
 0.472
G3P8V9_GASAC
Rhotekin 2a.
      
 0.472
G3P559_GASAC
EBP cholestenol delta-isomerase.
      
 0.451
G3NDR3_GASAC
Epithelial cell adhesion molecule.
   
  
 0.433
G3P3Z6_GASAC
EF-hand domain (C-terminal) containing 2.
      
 0.428
G3PLN6_GASAC
Zgc:153311.
      
 0.400
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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