STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NLV9_GASACRBR-type E3 ubiquitin transferase. (528 aa)    
Predicted Functional Partners:
G3NXT5_GASAC
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.971
G3N5F0_GASAC
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.967
G3PMC3_GASAC
NEDD8 ubiquitin like modifier, like.
    
 0.966
G3PCG6_GASAC
Ribosomal protein S27a.
    
 0.962
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
  0.958
G3NPM0_GASAC
Cullin 1b; Belongs to the cullin family.
   
 0.954
G3QA52_GASAC
Ubiquitin B.
    
 0.952
G3NY10_GASAC
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.935
CUL3
Cullin 3; Belongs to the cullin family.
   
 0.935
G3PM52_GASAC
Eukaryotic translation initiation factor 2B, subunit 5 epsilon.
 
      0.871
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.