Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
G3NLV9_GASACRBR-type E3 ubiquitin transferase. (528 aa)    
Predicted Functional Partners:
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.994
G3PCG6_GASAC
Ribosomal protein S27a.
    
  0.993
G3QA52_GASAC
Ubiquitin B.
    
 0.991
G3N5F0_GASAC
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.976
G3NY10_GASAC
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.973
CUL3
Cullin 3; Belongs to the cullin family.
   
 0.973
G3NPM0_GASAC
Cullin 1b; Belongs to the cullin family.
   
 0.968
G3PMC3_GASAC
NEDD8 ubiquitin like modifier, like.
   
 0.959
G3NXT5_GASAC
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.958
G3NAH7_GASAC
Uncharacterized protein.
   
 
  0.923
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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