STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAJC13DnaJ heat shock protein family (Hsp40) member C13. (2296 aa)    
Predicted Functional Partners:
G3PMC7_GASAC
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.751
G3NW04_GASAC
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
  
 0.693
G3PKG3_GASAC
Cyclin G associated kinase.
   
  
 0.646
G3NLK9_GASAC
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
      
 0.591
G3NSL2_GASAC
Ataxin 2.
   
  
 0.581
G3QBE0_GASAC
Synaptojanin 1.
   
  
 0.577
G3PDK2_GASAC
Glucosylceramidase.
      
 0.571
G3NAU0_GASAC
Sorting nexin 2.
   
 
 0.555
G3NZS1_GASAC
DnaJ (Hsp40) homolog, subfamily C, member 10.
      
 0.555
G3NWK1_GASAC
Sorting nexin 1a.
    
 
 0.544
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.