G3NLX7_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3NLX7_GASAC

Uncharacterized protein. (802 aa)

Predicted Functional Partners:

G3PYF8_GASAC

0.963

G3NH35_GASAC

0.953

MAP2K4

0.947

G3Q6L0_GASAC

0.945

MAP2K6

0.925

G3P6X5_GASAC

0.904

G3NTV9_GASAC

0.900

UBE2N

0.892

G3Q4R3_GASAC

0.892

G3P7A3_GASAC

0.890

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NH35_GASAC	G3NLX7_GASAC	ENSGACP00000004643	ENSGACP00000006340	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	Uncharacterized protein.	0.953
G3NH35_GASAC	G3NTV9_GASAC	ENSGACP00000004643	ENSGACP00000008777	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	0.921
G3NH35_GASAC	G3P6X5_GASAC	ENSGACP00000004643	ENSGACP00000013349	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	TGF-beta activated kinase 1 (MAP3K7) binding protein 3.	0.909
G3NH35_GASAC	G3P7A3_GASAC	ENSGACP00000004643	ENSGACP00000013477	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	Tumor necrosis factor receptor superfamily, member 1a.	0.509
G3NH35_GASAC	G3PYF8_GASAC	ENSGACP00000004643	ENSGACP00000022648	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.991
G3NH35_GASAC	G3Q4R3_GASAC	ENSGACP00000004643	ENSGACP00000024867	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.502
G3NH35_GASAC	UBE2N	ENSGACP00000004643	ENSGACP00000015526	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.502
G3NLX7_GASAC	G3NH35_GASAC	ENSGACP00000006340	ENSGACP00000004643	Uncharacterized protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.953
G3NLX7_GASAC	G3NTV9_GASAC	ENSGACP00000006340	ENSGACP00000008777	Uncharacterized protein.	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	0.900
G3NLX7_GASAC	G3P6X5_GASAC	ENSGACP00000006340	ENSGACP00000013349	Uncharacterized protein.	TGF-beta activated kinase 1 (MAP3K7) binding protein 3.	0.904
G3NLX7_GASAC	G3P7A3_GASAC	ENSGACP00000006340	ENSGACP00000013477	Uncharacterized protein.	Tumor necrosis factor receptor superfamily, member 1a.	0.890
G3NLX7_GASAC	G3PYF8_GASAC	ENSGACP00000006340	ENSGACP00000022648	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.963
G3NLX7_GASAC	G3Q4R3_GASAC	ENSGACP00000006340	ENSGACP00000024867	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.892
G3NLX7_GASAC	G3Q6L0_GASAC	ENSGACP00000006340	ENSGACP00000025520	Uncharacterized protein.	Mitogen-activated protein kinase kinase 7.	0.945
G3NLX7_GASAC	MAP2K4	ENSGACP00000006340	ENSGACP00000019084	Uncharacterized protein.	Mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily.	0.947
G3NLX7_GASAC	MAP2K6	ENSGACP00000006340	ENSGACP00000014471	Uncharacterized protein.	Mitogen-activated protein kinase kinase 6.	0.925
G3NLX7_GASAC	UBE2N	ENSGACP00000006340	ENSGACP00000015526	Uncharacterized protein.	Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.892
G3NTV9_GASAC	G3NH35_GASAC	ENSGACP00000008777	ENSGACP00000004643	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.921
G3NTV9_GASAC	G3NLX7_GASAC	ENSGACP00000008777	ENSGACP00000006340	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	Uncharacterized protein.	0.900
G3NTV9_GASAC	G3P6X5_GASAC	ENSGACP00000008777	ENSGACP00000013349	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	TGF-beta activated kinase 1 (MAP3K7) binding protein 3.	0.879