Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NLY1_GASACClarin 1. (232 aa)    
Predicted Functional Partners:
G3PAF2_GASAC
Usher syndrome 1C.
      
 0.673
G3Q2D7_GASAC
WD repeat domain 5.
      
 0.603
G3P240_GASAC
L1 cell adhesion molecule, paralog a.
      
 0.574
G3NG69_GASAC
Whirlin b.
      
 0.554
G3Q1Y6_GASAC
Whirlin a.
      
 0.554
G3PA92_GASAC
Usher syndrome 1Ga (autosomal recessive).
      
 0.553
G3PNB2_GASAC
Usher syndrome 1Gb (autosomal recessive).
      
 0.553
G3P502_GASAC
Uncharacterized protein.
      
 0.550
G3PV28_GASAC
Usher syndrome 2A (autosomal recessive, mild).
      
 0.550
G3P7E5_GASAC
Calcium and integrin binding family member 2.
      
 0.472
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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