Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NLY7_GASACZinc finger, FYVE domain containing 21. (248 aa)    
Predicted Functional Partners:
G3NZB9_GASAC
SPG11 vesicle trafficking associated, spatacsin.
   
 
 0.941
G3NM36_GASAC
Adaptor related protein complex 5 subunit sigma 1.
    
 
 0.582
G3NK91_GASAC
Tectonin beta-propeller repeat containing 2.
   
  
 0.551
G3NYX8_GASAC
Adaptor related protein complex 5 subunit zeta 1.
    
 
 0.544
G3NDK9_GASAC
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
      
 0.471
G3N9J3_GASAC
Tetratricopeptide repeat domain 19.
    
 
 0.451
G3P714_GASAC
Uncharacterized protein.
      
 0.444
G3NX84_GASAC
Thyroid hormone receptor interactor 12.
      
 0.442
G3PHB2_GASAC
Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
      
 0.402
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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