Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NLZ7_GASACSplicing factor 3b, subunit 6. (125 aa)    
Predicted Functional Partners:
G3NDR5_GASAC
Splicing factor 3b, subunit 3.
    
 0.999
G3NI77_GASAC
Splicing factor 3b, subunit 4.
    
 0.999
G3NLV0_GASAC
PHD finger protein 5A.
   
 0.999
G3P253_GASAC
Splicing factor 3b, subunit 1.
   
 0.999
G3P7W6_GASAC
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
   
 0.999
G3Q5I4_GASAC
Splicing factor 3b, subunit 2.
    
 0.999
G3PA33_GASAC
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.993
G3P5P1_GASAC
DEAD (Asp-Glu-Ala-Asp) box helicase 42.
    
  0.991
G3PR91_GASAC
Splicing factor 3a, subunit 2.
   
 0.989
G3PLX6_GASAC
Small nuclear ribonucleoprotein polypeptide A.
   
 0.986
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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