Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
G3NM07_GASACRegulation of nuclear pre-mRNA domain containing 1A. (299 aa)    
Predicted Functional Partners:
G3PSV1_GASAC
RNA polymerase II associated protein 2.
   
 0.968
G3Q6T9_GASAC
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.953
G3NC28_GASAC
Polymerase (RNA) II (DNA directed) polypeptide C.
    
 0.941
G3NLB5_GASAC
Polymerase (RNA) II (DNA directed) polypeptide D.
    
  0.941
POLR2E
RNA polymerase II subunit E.
    
  0.939
G3PV24_GASAC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.939
G3NU38_GASAC
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.938
G3NWJ8_GASAC
Polymerase (RNA) II (DNA directed) polypeptide F.
    
  0.936
G3Q0L5_GASAC
Polymerase (RNA) II (DNA directed) polypeptide G-like.
    
  0.929
G3Q0C4_GASAC
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
    
 
 0.926
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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