Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NM46_GASACAgrin. (1878 aa)    
Predicted Functional Partners:
G3NDT0_GASAC
Peptidase S72 domain-containing protein.
   
 0.994
G3NFA8_GASAC
Dystroglycan 1.
   
 0.994
MUSK
Muscle associated receptor tyrosine kinase.
    
 0.960
G3NM53_GASAC
NtA domain-containing protein.
 
      0.900
G3NDH4_GASAC
NudC domain containing 1.
    
   0.821
G3PYA2_GASAC
Low density lipoprotein receptor-related protein 4.
    
 0.819
G3NNN8_GASAC
Low density lipoprotein receptor-related protein 2a.
    
 0.704
G3NUV7_GASAC
Low density lipoprotein receptor-related protein 2b.
    
 0.704
G3PJ16_GASAC
EGF-like domain-containing protein.
    
 0.704
G3PJ24_GASAC
EGF-like domain-containing protein.
    
 0.704
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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