STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NM49_GASACNotochord homeobox. (252 aa)    
Predicted Functional Partners:
G3NXT1_GASAC
T-box transcription factor Ta.
   
 0.808
G3Q9L7_GASAC
Brain-specific homeobox.
   
 
0.755
G3NNP8_GASAC
T-box transcription factor Tb.
    
 0.712
G3NI63_GASAC
T-box transcription factor 21.
    
 0.652
G3NV84_GASAC
Forkhead box A2.
    
 0.647
G3PDL8_GASAC
Fork-head domain-containing protein.
    
 0.647
G3PFV0_GASAC
T-box transcription factor 16.
   
 0.631
G3NK14_GASAC
Fork-head domain-containing protein.
    
 0.618
G3PGF5_GASAC
Forkhead box A3.
    
 0.529
TEAD3
TEA domain transcription factor 3.
   
 
  0.459
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.