STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NM57_GASACNuclear transcription factor Y, gamma. (355 aa)    
Predicted Functional Partners:
G3NYM6_GASAC
Nuclear transcription factor Y, alpha, like.
   
 0.999
G3Q6Q2_GASAC
Nuclear transcription factor Y, beta a.
   
 0.999
G3PZR6_GASAC
Polymerase (DNA directed), epsilon 3 (p17 subunit).
   
 0.992
G3P3S4_GASAC
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.890
G3PMY7_GASAC
Uncharacterized protein.
     
 0.873
G3P8U9_GASAC
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
     
 0.861
GATA2
GATA binding protein 2.
   
 
 0.775
G3P503_GASAC
GATA binding protein 2a.
   
 
 0.774
G3NIG5_GASAC
Helicase, lymphoid specific.
   
 
 0.706
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 
 0.698
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (16%) [HD]