Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NM65_GASACEmpty spiracles homeobox 1. (231 aa)    
Predicted Functional Partners:
G3PK56_GASAC
LIM homeobox 1a.
    
 0.678
G3QAB4_GASAC
LIM homeobox 1b.
    
 0.678
G3PKP2_GASAC
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.646
G3P0K3_GASAC
Paired box 2a.
    
 0.617
G3NJ88_GASAC
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
    
   0.616
G3PNF6_GASAC
Doublesex and mab-3 related transcription factor 2a.
   
 
 0.566
GATA2
GATA binding protein 2.
   
 
 0.563
G3P503_GASAC
GATA binding protein 2a.
   
 
 0.563
G3NM92_GASAC
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
   0.561
G3NQ08_GASAC
Homeobox domain-containing protein.
   
 
 0.561
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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