Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUP62Nucleoporin 62. (550 aa)    
Predicted Functional Partners:
NUP54
Nucleoporin 54.
   
 0.999
G3NCU1_GASAC
Nucleoporin 58.
   
 0.997
G3PL52_GASAC
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
 0.996
G3PI18_GASAC
Nucleoporin 88.
   
 0.995
G3NB37_GASAC
Nucleoporin 98.
   
 0.994
G3PWA7_GASAC
Nup214_FG domain-containing protein.
   
 0.994
G3NP66_GASAC
Nucleoporin 153.
   
 0.992
G3PF71_GASAC
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.989
G3PU96_GASAC
Nucleoporin 188.
    
 0.988
G3PXB0_GASAC
Nucleoporin 155.
   
 0.988
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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