Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NM88_GASACZgc:162872. (769 aa)    
Predicted Functional Partners:
G3NI85_GASAC
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
   
 
 0.751
G3NIM1_GASAC
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
   
 
 0.751
G3NPW4_GASAC
Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
 0.590
G3NYP6_GASAC
Ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast).
      
 0.549
G3PJY9_GASAC
RAB35, member RAS oncogene family b.
    
 
 0.522
G3PQ04_GASAC
Si:dkey-16l2.16.
    
 
 0.522
G3PSC0_GASAC
Immunoglobulin superfamily, DCC subclass, member 3.
    
  0.497
G3PW47_GASAC
Immunoglobulin superfamily, DCC subclass, member 4.
    
  0.497
G3PY05_GASAC
Neogenin 1b.
    
  0.497
G3Q2S1_GASAC
DCC netrin 1 receptor.
    
  0.497
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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