STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NM92_GASACX-ray repair complementing defective repair in Chinese hamster cells 6. (618 aa)    
Predicted Functional Partners:
G3NS32_GASAC
X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.
   
 0.999
G3NB89_GASAC
Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family.
    
 0.993
G3PM28_GASAC
DNA ligase.
   
 0.991
G3P3Z7_GASAC
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.990
G3Q9F4_GASAC
DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae).
   
 0.980
G3QBX6_GASAC
RAD50 homolog, double strand break repair protein.
   
 0.980
G3Q0G8_GASAC
DNA ligase.
   
 0.973
G3QCE5_GASAC
DNA ligase.
   
 0.973
G3PZM4_GASAC
Uncharacterized protein.
   
 0.961
G3PZM7_GASAC
Uncharacterized protein.
    
 0.961
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.