Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NMA8_GASACRetinol binding protein 3. (633 aa)    
Predicted Functional Partners:
G3P083_GASAC
Retinal G protein coupled receptor a.
      
 0.725
G3PN55_GASAC
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
   
  
 0.672
G3PID5_GASAC
Amyloid beta (A4) precursor-like protein 2.
      
 0.671
G3N964_GASAC
Rhodopsin.
   
  
 0.630
G3N968_GASAC
Rhodopsin.
   
  
 0.630
G3NG75_GASAC
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
      
 0.623
G3P658_GASAC
Retinal degeneration 3, GUCY2D regulator.
      
 0.622
G3NMY6_GASAC
Lymphocyte antigen 6 family member pge.
      
 0.599
G3NQ01_GASAC
Retinol binding protein 2a, cellular; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.578
G3N6L6_GASAC
Opsin 1 (cone pigments), short-wave-sensitive 1.
   
  
 0.560
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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