Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NMC2_GASACUbiquitin domain containing 1b. (261 aa)    
Predicted Functional Partners:
G3QA52_GASAC
Ubiquitin B.
    
 
 0.680
FRMPD2
FERM and PDZ domain containing 2.
      
 0.654
G3NME7_GASAC
MMS19 homolog, cytosolic iron-sulfur assembly component.
      
 0.621
G3Q149_GASAC
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
    
   0.561
G3NVT2_GASAC
TGF_BETA_2 domain-containing protein.
      
 0.553
G3NW70_GASAC
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.552
G3Q1D2_GASAC
F-box and WD repeat domain containing 11a.
    
 
 0.539
G3PCJ7_GASAC
Ubiquitin specific peptidase 48; Belongs to the peptidase C19 family.
      
 0.529
G3PNT4_GASAC
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
      
 0.510
G3PEN8_GASAC
Yes-associated protein 1.
    
   0.499
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.